从简单的进化理论，到什么是进化树，怎么才会用到进化树，到如何获得好的有意义的进化树。短短几页讲述的很明白，句句简单，句句深厚。
Phylogeny　for　the　faint　of　heart　a　tutorial.　2003.TRENDS in Genetics

 http://www.cs.queensu.ca/home/cisc875/faint.pdf

不过是英文的。不知有没有牛人大概翻译一下拿出来共享呢~

 Phylogenetic trees seem to be finding ever broader applications, and researchers from very different backgrounds are becoming interested in what they might have to say. This tutorial aims to introduce the basics of building and interpreting phylogenetic trees. It is intended for those wanting to understand better what they are looking at when they look at someone else’s trees or to begin learning how to build their own. Topics covered include: how to read a tree, assembling a dataset, multiple sequence alignment (how it works and when it does not), phylogenetic methods, bootstrap analysis and long-branch artefacts, and software and resources.